DeepMet

Record Information
HMDB Status	expected
Creation Date	2024-02-20 23:34:09 UTC
Update Date	2025-03-21 17:56:30 UTC
HMDB ID	HMDB0000960
Metabolite Identification
DeepMet ID	DMID00001811
Name	dGDP
Frequency	3447.3
Structure
Chemical Formula	C₁₀H₁₅N₅O₁₀P₂
Molecular Mass	427.0294
SMILES	Nc1nc2c(ncn2C2CC(O)C(COP(=O)(O)OP(=O)(O)O)O2)c(=O)[nH]1
InChI Key	CIKGWCTVFSRMJU-UHFFFAOYSA-N
Chemical Taxonomy
Kingdom	organic compounds
Superclass	nucleosides, nucleotides, and analogues
Class	purine nucleotides
Subclass	purine deoxyribonucleotides
Direct Parent	purine 2'-deoxyribonucleoside diphosphates
Geometric Descriptor	aromatic heteropolycyclic compounds
Alternative Parents	azacyclic compounds heteroaromatic compounds hydrocarbon derivatives hypoxanthines imidazoles lactams monoalkyl phosphates monosaccharides n-substituted imidazoles organic oxides organic pyrophosphates organopnictogen compounds oxacyclic compounds pentose phosphates primary amines purines and purine derivatives pyrimidones secondary alcohols tetrahydrofurans vinylogous amides
Substituents	lactam pentose phosphate monosaccharide pyrimidone imidazopyrimidine pyrimidine saccharide organic oxide aromatic heteropolycyclic compound imidazole organonitrogen compound organopnictogen compound organoheterocyclic compound azole n-substituted imidazole alcohol vinylogous amide azacycle tetrahydrofuran heteroaromatic compound purine 2'-deoxyribonucleoside diphosphate organic pyrophosphate oxacycle organic oxygen compound phosphoric acid ester monoalkyl phosphate secondary alcohol hypoxanthine hydrocarbon derivative primary amine purine organic nitrogen compound organic phosphoric acid derivative amine alkyl phosphate organooxygen compound

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